BFAIR

BFAIR (Big and FAIR omics data handling) is an informatics pipeline for sample submission, metadata tracking, raw data processing, and results retrieval.

Documentation

• Getting Started
• API Reference
  • Introduction
  • MFA tools
• Example Notebooks
  • Introduction
  • Cobra model parser
  • MFA using INCA in MATLAB - now all in Python!
  • Reimport MFA data after calculation in INCA
  • INCA re-import
  • MFA data as constraints for a COBRA model
  • Pathway visualization
  • A full MFA analysis workflow
  • Reimport MFA data after calculation in INCA
  • Model compatibility
  • Sampling
  • Pathway visualization
• Contributor Guide
  • Quickstart
  • Guidelines

Indices and tables

• Index

• Module Index

• Search Page