BFAIR.mfa.visualization.plot_sampled_reaction_fluxes

BFAIR.mfa.visualization.plot_sampled_reaction_fluxes(sampled_fluxes, reactions, reaction_id, bins=10, alpha=0.001)

Plots the distribution of the sampled values for one selected reaction as a histogram and a normal distribution.

Parameters

sampled_fluxespandas.Dataframe

The calculated fluxes, output of sampling. For each reaction, n fluxes will be calculated (n = number of samples taken).

reactionslist

List of reactions, e.g. output of get_subsytem_reactions().

reaction_idint

ID of the reaction in the reactions list.

binsint

Number of bins used for the histogram. Defaults to 10.

Returns

figmatplotlib.Figure

Figure of sampled value distribution for one reaction.